Topologies


N.B.: If you use the following files in your work, please cite the primary source. (see Description field)

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Name Forcefield Lipid Software Files
Ingólfsson2014_PEPC martini 2.0 PEPC - PC(16:0/​20:2(11Z,14Z)) Gromacs PEPC.gro, PEPC.itp
Wassenaar2015_PUPC martini 2.0 PUPC - PC(16:0/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Gromacs PUPC.gro, PUPC.itp
Ingólfsson2014_PUPC martini 2.0 PUPC - PC(16:0/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Gromacs PUPC.gro, PUPC.itp
Wassenaar2015_P0PC martini 2.0 P0PC - PC(16:0/​0:0) Gromacs P0PC.gro, P0PC.itp
Ingólfsson2014_P0PC martini 2.0 P0PC - PC(16:0/​0:0) Gromacs P0PC.gro, P0PC.itp
Wassenaar2015_O0PC martini 2.0 O0PC - PC(18:1(9Z)/​0:0) Gromacs O0PC.gro, O0PC.itp
Ingólfsson2014_O0PC martini 2.0 O0PC - PC(18:1(9Z)/​0:0) Gromacs O0PC.gro, O0PC.itp
Wassenaar2015_I0PC martini 2.0 I0PC - PC(18:2(9Z,12Z)/​0:0) Gromacs I0PC.gro, I0PC.itp
Ingólfsson2014_I0PC martini 2.0 I0PC - PC(18:2(9Z,12Z)/​0:0) Gromacs I0PC.gro, I0PC.itp
Wassenaar2015_A0PC martini 2.0 A0PC - PC(20:4(5Z,8Z,11Z,14Z)/​0:0) Gromacs A0PC.gro, A0PC.itp
Ingólfsson2014_A0PC martini 2.0 A0PC - PC(20:4(5Z,8Z,11Z,14Z)/​0:0) Gromacs A0PC.gro, A0PC.itp
Wassenaar2015_U0PC martini 2.0 U0PC - PC(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/​0:0) Gromacs U0PC.gro, U0PC.itp
Ingólfsson2014_U0PC martini 2.0 U0PC - PC(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/​0:0) Gromacs U0PC.gro, U0PC.itp
Wassenaar2015_POPE martini 2.0 POPE - PE(16:0/​18:1(9Z)) Gromacs POPE.gro, POPE.itp
Ingólfsson2014_POPE martini 2.0 POPE - PE(16:0/​18:1(9Z)) Gromacs POPE.gro, POPE.itp
Marrink2007_DPPE martini 2.0 DPPE - PE(16:0/​16:0) Gromacs DPPE.gro, DPPE.itp
Wassenaar2015_PIPE martini 2.0 PIPE - PE(16:0/​18:2(9Z,12Z)) Gromacs PIPE.gro, PIPE.itp
Ingólfsson2017_OIPE martini 2.0 OIPE - PE(18:1(9Z)/​18:2(9Z,12Z)) Gromacs OIPE.gro, OIPE.itp
Wassenaar2015_DOPE martini 2.0 DOPE - PE(18:1(9Z)/​18:1(9Z)) Gromacs DOPE.gro, DOPE.itp
Ingólfsson2014_DOPE martini 2.0 DOPE - PE(18:1(9Z)/​18:1(9Z)) Gromacs DOPE.gro, DOPE.itp
Wassenaar2015_DUPE martini 2.0 DUPE - PE(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Gromacs DUPE.gro, DUPE.itp
Ingólfsson2014_DUPE martini 2.0 DUPE - PE(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Gromacs DUPE.gro, DUPE.itp
Wassenaar2015_PUPE martini 2.0 PUPE - PE(16:0/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Gromacs PUPE.gro, PUPE.itp
Ingólfsson2014_PUPE martini 2.0 PUPE - PE(16:0/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Gromacs PUPE.gro, PUPE.itp
Wassenaar2015_PAPE martini 2.0 PAPE - PE(16:0/​20:4(5Z,8Z,11Z,14Z)) Gromacs PAPE.gro, PAPE.itp
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