Topologies


N.B.: If you use the following files in your work, please cite the primary source. (see Description field)

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entries

Name Forcefield Lipid Software Files
Wu2014_LC12 charmm36 LC12 - PC(12:0/​0:0) Charmm LC12.pdb, LC12.str
Wu2014_LC14 charmm36 LC14 - PC(14:0/​0:0) Charmm LC14.pdb, LC14.str
Klauda2010_POPE charmm36 POPE - PE(16:0/​18:1(9Z)) Charmm POPE.pdb, POPE.str
Klauda2010_PKPE charmm36 PKPE - PE(16:0/​18:1(11Z)) Charmm PKPE.pdb, PKPE.str
Klauda2010_SOPE charmm36 SOPE - PE(18:0/​18:1(9Z)) Charmm SOPE.pdb, SOPE.str
Klauda2010_DPPE charmm36 DPPE - PE(16:0/​16:0) Charmm DPPE.pdb, DPPE.str
Klauda2010_PIPE charmm36 PIPE - PE(16:0/​18:2(9Z,12Z)) Charmm PIPE.pdb, PIPE.str
Klauda2010_SIPE charmm36 SIPE - PE(18:0/​18:2(9Z,12Z)) Charmm SIPE.pdb, SIPE.str
Klauda2010_DOPE charmm36 DOPE - PE(18:1(9Z)/​18:1(9Z)) Charmm DOPE.pdb, DOPE.str
Klauda2012_DUPE charmm36 DUPE - PE(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Charmm DUPE.pdb, DUPE.str
Klauda2012_SUPE charmm36 SUPE - PE(18:0/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Charmm SUPE.pdb, SUPE.str
Klauda2012_PUPE charmm36 PUPE - PE(16:0/​22:6(4Z,7Z,10Z,13Z,16Z,19Z)) Charmm PUPE.pdb, PUPE.str
Klauda2010_DSPE charmm36 DSPE - PE(18:0/​18:0) Charmm DSPE.pdb, DSPE.str
Klauda2010_DLPE charmm36 DLPE - PE(12:0/​12:0) Charmm DLPE.pdb, DLPE.str
Klauda2010_DYPE charmm36 DYPE - PE(16:1(9Z)/​16:1(9Z)) Charmm DYPE.pdb, DYPE.str
Klauda2010_DIPE charmm36 DIPE - PE(18:2(9Z,12Z)/​18:2(9Z,12Z)) Charmm DIPE.pdb, DIPE.str
Klauda2012_SAPE charmm36 SAPE - PE(18:0/​20:4(5Z,8Z,11Z,14Z)) Charmm SAPE.pdb, SAPE.str
Klauda2010_DMPE charmm36 DMPE - PE(14:0/​14:0) Charmm DMPE.pdb, DMPE.str
Klauda2010_IWPE charmm36 IWPE - PE(18:2(9Z,12Z)/​18:3(9Z,12Z,15Z)) Charmm IWPE.pdb, IWPE.str
Klauda2012_DAPE charmm36 DAPE - PE(20:4(5Z,8Z,11Z,14Z)/​20:4(5Z,8Z,11Z,14Z)) Charmm DAPE.pdb, DAPE.str
Klauda2010_DGPE charmm36 DGPE - PE(20:1(11Z)/​20:1(11Z)) Charmm DGPE.pdb, DGPE.str
Klauda2010_OYPE charmm36 OYPE - PE(18:1(9Z)/​16:1(9Z)) Charmm OYPE.pdb, OYPE.str
Klauda2010_YOPE charmm36 YOPE - PE(16:1(9Z)/​18:1(9Z)) Charmm YOPE.pdb, YOPE.str
Klauda2010_PYPE charmm36 PYPE - PE(16:0/​16:1(9Z)) Charmm PYPE.pdb, PYPE.str
Yu2018_PCPE charmm36 PCPE - PE(16:0/​18:0(11Cp)) Charmm PCPE.pdb, PCPE.str
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