Topologies


N.B.: If you use the following files in your work, please cite the primary source. (see Description field)

Lipid: POG1 - GM1(d16:1/18:1(9Z))
Forcefield: martini 2.0
Software: Gromacs 3.3, 4.0, 4.5, 4.6, 5.0, 5.1, 2016
Version:Ingólfsson2017
Files: POG1.gro, POG1.itp
Description:

Primary source: https://bbs.llnl.gov/neuronal-membrane-data.html

References: Ingólfsson2014 Journal of the American Chemical Society, 136. Lipid Organization of the Plasma Membrane
López2013 Journal of Chemical Theory and Computation, 9. Martini Force Field Parameters for Glycolipids
Marrink2007 The Journal of Physical Chemistry B, 111. The MARTINI Force Field:  Coarse Grained Model for Biomolecular Simulations
Marrink2004 The Journal of Physical Chemistry B, 108. Coarse Grained Model for Semiquantitative Lipid Simulations
Ingólfsson2017 Biophysical Journal, 113. Computational Lipidomics of the Neuronal Plasma Membrane
Available Membranes

Curator: Jean-Marc Crowet on Dec. 12, 2020

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