Topologies


N.B.: If you use the following files in your work, please cite the primary source. (see Description field)

Lipid: CER4 - Cer(d18:2(4E,8E)(9Me)/18:1(3E)(2OH))
Forcefield: charmm36
Software: Charmm --
Version:Venable2014
Files: CER4.pdb, CER4.str
Description:

Primary source: http://mackerell.umaryland.edu/charmm_ff.shtml
These parameters are part of the toppar_all36_lipid_sphingo.str file

This lipid is named CER3E in charmm36

References: Venable2014 Biophysical Journal, 107. CHARMM All-Atom Additive Force Field for Sphingomyelin: Elucidation of Hydrogen Bonding and of Positive Curvature
Available Membranes

Curator: Jean-Marc Crowet on Aug. 24, 2020

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