Topologies


N.B.: If you use the following files in your work, please cite the primary source. (see Description field)

Lipid: OPPE - PE(18:1(9Z)/16:0)
Forcefield: opls-aa Rog2016
Software: Gromacs 4.5, 4.6, 5.0
Version:Rog2015
Files: OPPE.gro, OPPE.itp
Description:

Primary source: https://www.sciencedirect.com/science/article/pii/S2352340916301755?via%3Dihub
Bond parameters have been added between atoms C27 and C28 compared to the original file.

References: Róg2016 Data in Brief, 7. Data including GROMACS input files for atomistic molecular dynamics simulations of mixed, asymmetric bilayers including molecular topologies, equilibrated structures, and force field for lipids compatible with OPLS-AA parameters
Róg2015 Biochimica et Biophysica Acta (BBA) - Biomembranes, 1858. Interdigitation of long-chain sphingomyelin induces coupling of membrane leaflets in a cholesterol dependent manner
Available Membranes

Curator: Jean-Marc Crowet on Dec. 10, 2020

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