Topologies


N.B.: If you use the following files in your work, please cite the primary source. (see Description field)

Lipid: PUPS - PS(16:0/22:6(4Z,7Z,10Z,13Z,16Z,19Z))
Forcefield: martini 2.0
Software: Gromacs 3.3, 4.0, 4.5, 4.6, 5.0, 5.1, 2016
Version:Wassenaar2015
Files: PUPS.gro, PUPS.itp
Description:

Primary source: http://cgmartini.nl/index.php/force-field-parameters/lipids2/351-lipid.html?dir=PS&lipid=PUPS

References: Wassenaar2015 Journal of Chemical Theory and Computation, 11. Computational Lipidomics with insane: A Versatile Tool for Generating Custom Membranes for Molecular Simulations
Baoukina2008 Proceedings of the National Academy of Sciences, 105. The molecular mechanism of lipid monolayer collapse
Marrink2007 The Journal of Physical Chemistry B, 111. The MARTINI Force Field:  Coarse Grained Model for Biomolecular Simulations
Marrink2004 The Journal of Physical Chemistry B, 108. Coarse Grained Model for Semiquantitative Lipid Simulations
Available Membranes

Curator: Jean-Marc Crowet on April 14, 2020

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